Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RPAIN ENSBTAG00000025149

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Description

RPA interacting protein [Source:VGNC Symbol;Acc:VGNC:34097]

Location

Primary_assembly 19: 26,119,984-26,127,138 reverse strand.

ARS-UCD1.3:CM008186.2

About this gene

This gene has 5 transcripts (splice variants) and 188 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000113782.1	RPAIN-201	1536	246aa	ENSBTAP00000092202.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000035212.5	RPAIN-202	821	226aa	ENSBTAP00000035090.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2TBS0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000122663.1	RPAIN-203	464	148aa	ENSBTAP00000081936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000122151.1	RPAIN-205	338	107aa	ENSBTAP00000093137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000110102.1	RPAIN-204	338	106aa	ENSBTAP00000091129.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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