Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: VIT ENSBTAG00000024980

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Description

vitrin [Source:VGNC Symbol;Acc:VGNC:36802]

Location

Primary_assembly 11: 19,157,465-19,282,473 forward strand.

ARS-UCD2.0:CM008178.2

About this gene

This gene has 5 transcripts (splice variants), 217 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000066858.3	VIT-201	4114	652aa	ENSBTAP00000059169.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LIX3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000070602.3	VIT-202	4036	626aa	ENSBTAP00000060091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MWW0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000034836.6	VIT-205	3820	652aa	ENSBTAP00000034720.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MER4	-
ENSBTAT00000124333.2	VIT-204	3754	630aa	ENSBTAP00000096043.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TIJ4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000094226.2	VIT-203	3523	588aa	ENSBTAP00000085659.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SNY5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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