Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SNCA ENSBTAG00000024957

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Description

synuclein alpha [Source:VGNC Symbol;Acc:VGNC:35059]

Location

Primary_assembly 6: 34,853,369-35,032,295 forward strand.

ARS-UCD2.0:CM008173.2

About this gene

This gene has 10 transcripts (splice variants), 189 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000110660.2	SNCA-204	1806	188aa	ENSBTAP00000091232.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T406	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000091206.2	SNCA-202	1805	131aa	ENSBTAP00000097028.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TJD0	-
ENSBTAT00000099317.2	SNCA-205	1733	134aa	ENSBTAP00000097982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TI69	-
ENSBTAT00000101166.2	SNCA-203	1500	158aa	ENSBTAP00000096169.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TGJ4	-
ENSBTAT00000132354.2	SNCA-201	1230	145aa	ENSBTAP00000092954.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TAD5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000113306.2	SNCA-207	1220	167aa	ENSBTAP00000082030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SEJ8	-
ENSBTAT00000130135.2	SNCA-206	1143	167aa	ENSBTAP00000088553.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SQE3	-
ENSBTAT00000021300.6	SNCA-210	855	148aa	ENSBTAP00000021300.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6Z2F7	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000119870.2	SNCA-208	850	147aa	ENSBTAP00000076039.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S1S7	-
ENSBTAT00000066780.3	SNCA-209	846	145aa	ENSBTAP00000061053.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF7A1L9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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