Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATOH8 ENSBTAG00000024000

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Description

atonal bHLH transcription factor 8 [Source:VGNC Symbol;Acc:VGNC:26272]

Location

Primary_assembly 11: 49,083,730-49,126,218 reverse strand.

ARS-UCD2.0:CM008178.2

About this gene

This gene has 4 transcripts (splice variants), 173 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000108197.1	ATOH8-203	2155	368aa	ENSBTAP00000083635.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SE08	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000130636.1	ATOH8-201	2254	346aa	ENSBTAP00000088509.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SWR8	-
ENSBTAT00000109539.1	ATOH8-202	2187	317aa	ENSBTAP00000086967.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SNP0	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000033053.6	ATOH8-204	1244	328aa	ENSBTAP00000032978.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MPZ6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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