Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
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  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
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ID History
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Gene: TAFA5 ENSBTAG00000022986

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Description

TAFA chemokine like family member 5 [Source:VGNC Symbol;Acc:VGNC:28779]

Gene Synonyms

FAM19A5

Location

Primary_assembly 5: 118,304,835-118,480,465 forward strand.

ARS-UCD1.3:CM008172.2

About this gene

This gene has 2 transcripts (splice variants) and 338 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000031229.6	TAFA5-201	1367	132aa	ENSBTAP00000031185.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MC17 Q3ZBS2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000086589.2	TAFA5-202	1469	125aa	ENSBTAP00000067646.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M2J6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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