Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SOX21 ENSBTAG00000022484

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Description

SRY-box transcription factor 21 [Source:VGNC Symbol;Acc:VGNC:35147]

Location

Primary_assembly 12: 69,199,087-69,204,847 reverse strand.

ARS-UCD2.0:CM008179.2

About this gene

This gene has 3 transcripts (splice variants), 161 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000133108.1	SOX21-203	1791	277aa	ENSBTAP00000077725.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BHN5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000101408.1	SOX21-201	1778	277aa	ENSBTAP00000099981.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BHN5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000030439.5	SOX21-202	1705	277aa	ENSBTAP00000030420.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BHN5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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