Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SOX5 ENSBTAG00000022360

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Description

SRY-box transcription factor 5 [Source:VGNC Symbol;Acc:VGNC:35149]

Location

Primary_assembly 5: 85,672,952-86,627,007 forward strand.

ARS-UCD2.0:CM008172.2

About this gene

This gene has 7 transcripts (splice variants), 210 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000077774.3	SOX5-205	3086	787aa	ENSBTAP00000059948.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MWN9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000129053.2	SOX5-203	3044	751aa	ENSBTAP00000094938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TDU3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000073558.3	SOX5-206	2984	753aa	ENSBTAP00000074161.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MR44	-
ENSBTAT00000112535.2	SOX5-201	2957	722aa	ENSBTAP00000087446.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LYZ7 A0AAA9SPZ7	-
ENSBTAT00000078881.2	SOX5-204	2887	724aa	ENSBTAP00000057086.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LQ49	-
ENSBTAT00000117201.2	SOX5-202	2717	642aa	ENSBTAP00000084723.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SP99	-
ENSBTAT00000030260.7	SOX5-207	1659	377aa	ENSBTAP00000030245.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6DMD2	-

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Summary

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