Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: C19H17orf49 ENSBTAG00000021931

.

Description

chromosome 19 C17orf49 homolog [Source:VGNC Symbol;Acc:VGNC:107267]

Location

Primary_assembly 19: 26,804,649-26,807,750 forward strand.

ARS-UCD1.3:CM008186.2

About this gene

This gene has 4 transcripts (splice variants) and 242 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000079462.2	C19H17orf49-201	657	197aa	ENSBTAP00000066070.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N6H0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000088624.1	C19H17orf49-203	1170	192aa	ENSBTAP00000082819.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000112148.1	C19H17orf49-204	1068	158aa	ENSBTAP00000080094.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000029238.5	C19H17orf49-202	750	157aa	ENSBTAP00000029238.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q32LD1	-

.

Summary

.

.