Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PAX2 ENSBTAG00000021566

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Description

paired box 2 [Source:VGNC Symbol;Acc:VGNC:32596]

Location

Primary_assembly 26: 21,590,544-21,679,823 forward strand.

ARS-UCD2.0:CM008193.2

About this gene

This gene has 5 transcripts (splice variants), 253 orthologues and 44 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000061634.5	PAX2-201	2715	504aa	ENSBTAP00000053412.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MNR2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000076433.2	PAX2-202	2646	481aa	ENSBTAP00000065861.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LYL1	-
ENSBTAT00000072226.3	PAX2-205	2437	458aa	ENSBTAP00000065249.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M9T4	-
ENSBTAT00000072560.3	PAX2-204	2388	408aa	ENSBTAP00000070388.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MGR0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000074347.2	PAX2-203	2168	388aa	ENSBTAP00000064175.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M711	-

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Summary

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