Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CFAP57 ENSBTAG00000021547

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Description

cilia and flagella associated protein 57 [Source:VGNC Symbol;Acc:VGNC:54907]

Location

Primary_assembly 3: 102,759,961-102,839,455 reverse strand.

ARS-UCD1.3:CM008170.2

About this gene

This gene has 5 transcripts (splice variants) and 211 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000067148.2	CFAP57-202	4420	1305aa	ENSBTAP00000063322.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M4Y2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000122893.1	CFAP57-203	4306	1267aa	ENSBTAP00000094227.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000022486.7	CFAP57-201	4120	1293aa	ENSBTAP00000022486.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MMP2	-
ENSBTAT00000082037.2	CFAP57-204	4114	1229aa	ENSBTAP00000066014.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M7I7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000067798.2	CFAP57-205	3841	1179aa	ENSBTAP00000059205.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MVQ5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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