Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
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ID History
- Gene history

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Gene: GTF3C5 ENSBTAG00000021373

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Description

ral transcription factor IIIC subunit 5 [Source:VGNC Symbol;Acc:VGNC:29706]

Location

Primary_assembly 11: 103,037,503-103,056,301 forward strand.

ARS-UCD2.0:CM008178.2

About this gene

This gene has 3 transcripts (splice variants) and 204 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000028493.8	GTF3C5-201	2291	539aa	ENSBTAP00000028493.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MYY8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000067025.3	GTF3C5-202	2231	519aa	ENSBTAP00000070067.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M855	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000113737.1	GTF3C5-203	1474	343aa	ENSBTAP00000078920.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S9U7	-

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Summary

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