Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CHIC1 ENSBTAG00000020826

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Description

cysteine rich hydrophobic domain 1 [Source:VGNC Symbol;Acc:VGNC:27292]

Location

Primary_assembly X: 77,317,880-77,359,496 reverse strand.

ARS-UCD1.3:CM008197.2

About this gene

This gene has 5 transcripts (splice variants), 200 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000067106.2	CHIC1-203	1100	236aa	ENSBTAP00000059744.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MWF0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000101712.1	CHIC1-201	1769	205aa	ENSBTAP00000093421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000117578.1	CHIC1-205	1358	193aa	ENSBTAP00000093437.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000128407.1	CHIC1-202	1217	208aa	ENSBTAP00000098011.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000027751.6	CHIC1-204	859	228aa	ENSBTAP00000027751.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BGF6	-

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Summary

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