Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
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ID History
- Gene history

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Gene: CEP78 ENSBTAG00000020752

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Description

centrosomal protein 78 [Source:VGNC Symbol;Acc:VGNC:27214]

Location

Primary_assembly 8: 54,148,861-54,184,457 forward strand.

ARS-UCD1.3:CM008175.2

About this gene

This gene has 3 transcripts (splice variants) and 220 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000081004.2	CEP78-201	3175	812aa	ENSBTAP00000074197.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MR63	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000124545.1	CEP78-202	3061	774aa	ENSBTAP00000098602.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000036653.6	CEP78-203	3049	770aa	ENSBTAP00000036509.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BK91	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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