Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CNTN1 ENSBTAG00000020679

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Description

contactin 1 [Source:VGNC Symbol;Acc:VGNC:27536]

Location

Primary_assembly 5: 39,772,742-40,037,738 reverse strand.

ARS-UCD1.3:CM008172.2

About this gene

This gene has 3 transcripts (splice variants), 278 orthologues and 37 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000045515.3	CNTN1-202	3416	1018aa	ENSBTAP00000042896.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MVI0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000086170.2	CNTN1-201	3221	1007aa	ENSBTAP00000066330.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M7H6	-
ENSBTAT00000072798.2	CNTN1-203	3047	627aa	ENSBTAP00000063971.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N3D8	-

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Summary

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