Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: FAT1 ENSBTAG00000020657

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Description

FAT atypical cadherin 1 [Source:VGNC Symbol;Acc:VGNC:52771]

Location

Primary_assembly 27: 16,420,035-16,546,078 reverse strand.

ARS-UCD2.0:CM008194.2

About this gene

This gene has 3 transcripts (splice variants), 236 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000082602.2	FAT1-201	15126	4600aa	ENSBTAP00000063675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M5W5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000027527.6	FAT1-202	14932	4588aa	ENSBTAP00000027527.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BKL9	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000070309.2	FAT1-203	14329	4387aa	ENSBTAP00000056902.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LJZ4	-

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Summary

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