Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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- Orthologues
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  - Gene tree
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Gene: ERCC6L2 ENSBTAG00000020626

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Description

ERCC excision repair 6 like 2 [Source:VGNC Symbol;Acc:VGNC:56964]

Location

Primary_assembly 8: 82,558,294-82,712,671 forward strand.

ARS-UCD1.3:CM008175.2

About this gene

This gene has 5 transcripts (splice variants) and 57 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000027486.5	ERCC6L2-205	5787	1558aa	ENSBTAP00000027486.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5E5P9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000113797.1	ERCC6L2-204	3596	1185aa	ENSBTAP00000088599.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000116550.1	ERCC6L2-203	3557	1171aa	ENSBTAP00000076199.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000050778.5	ERCC6L2-202	2580	262aa	ENSBTAP00000047434.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QPU6	-
ENSBTAT00000092479.1	ERCC6L2-201	647	202aa	ENSBTAP00000085259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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