Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: HPF1 ENSBTAG00000020132

.

Description

histone PARylation factor 1 [Source:VGNC Symbol;Acc:VGNC:56972]

Location

Primary_assembly 8: 1,641,328-1,667,011 reverse strand.

ARS-UCD1.3:CM008175.2

About this gene

This gene has 4 transcripts (splice variants) and 206 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000086420.2	HPF1-203	1568	420aa	ENSBTAP00000066963.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M902	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000131861.1	HPF1-204	1469	387aa	ENSBTAP00000094974.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000026815.6	HPF1-202	1424	385aa	ENSBTAP00000026815.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2VDY4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000081762.2	HPF1-201	1138	343aa	ENSBTAP00000061992.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LXQ1	-

.

Summary

.

.