Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CAMK2A ENSBTAG00000020087

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Description

calcium/calmodulin dependent protein kinase II alpha [Source:VGNC Symbol;Acc:VGNC:26721]

Location

Primary_assembly 7: 61,576,011-61,640,068 reverse strand.

ARS-UCD1.3:CM008174.2

About this gene

This gene has 7 transcripts (splice variants), 166 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000073084.2	CAMK2A-201	3035	489aa	ENSBTAP00000071965.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MKC7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000026762.6	CAMK2A-202	3002	478aa	ENSBTAP00000026762.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08E45	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000117181.1	CAMK2A-203	2942	458aa	ENSBTAP00000077328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000126356.1	CAMK2A-204	2831	421aa	ENSBTAP00000098605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000066579.2	CAMK2A-207	1477	471aa	ENSBTAP00000060808.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LUJ3	-
ENSBTAT00000073457.2	CAMK2A-206	1407	468aa	ENSBTAP00000059828.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LJZ2	-
ENSBTAT00000086523.2	CAMK2A-205	1386	461aa	ENSBTAP00000065878.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MB42	-

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Summary

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