Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LPCAT4 ENSBTAG00000020040

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Description

lysophosphatidylcholine acyltransferase 4 [Source:VGNC Symbol;Acc:VGNC:30964]

Location

Primary_assembly 10: 28,279,413-28,286,787 forward strand.

ARS-UCD1.3:CM008177.2

About this gene

This gene has 6 transcripts (splice variants), 192 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000128185.1	LPCAT4-206	2102	563aa	ENSBTAP00000079304.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000097491.1	LPCAT4-201	2099	562aa	ENSBTAP00000092448.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000102902.1	LPCAT4-205	2077	547aa	ENSBTAP00000102774.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000069179.2	LPCAT4-203	1901	496aa	ENSBTAP00000070151.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0JNE8	-
ENSBTAT00000026698.5	LPCAT4-202	1884	521aa	ENSBTAP00000026698.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6QFA5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000082188.2	LPCAT4-204	1730	502aa	ENSBTAP00000060518.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LL78	-

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Summary

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