Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Gene: CHTF18 ENSBTAG00000019743

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Description

chromosome transmission fidelity factor 18 [Source:VGNC Symbol;Acc:VGNC:27352]

Location

Primary_assembly 25: 669,572-684,174 forward strand.

ARS-UCD2.0:CM008192.2

About this gene

This gene has 3 transcripts (splice variants) and 162 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000026311.8	CHTF18-202	4120	1021aa	ENSBTAP00000026311.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1B8Q4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000098033.2	CHTF18-203	3830	949aa	ENSBTAP00000091198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SXJ8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000119260.2	CHTF18-201	3105	894aa	ENSBTAP00000082545.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S906	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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