Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SOHLH2 ENSBTAG00000018955

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Description

spermatosis and oosis specific basic helix-loop-helix 2 [Source:VGNC Symbol;Acc:VGNC:110068]

Location

Primary_assembly 12: 25,237,542-25,303,390 forward strand.

ARS-UCD1.3:CM008179.2

About this gene

This gene has 4 transcripts (splice variants), 86 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000025231.6	SOHLH2-201	2360	446aa	ENSBTAP00000025231.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MTG6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000092123.1	SOHLH2-202	2481	426aa	ENSBTAP00000103075.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000106306.1	SOHLH2-204	2296	393aa	ENSBTAP00000096458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000134508.1	SOHLH2-203	2137	339aa	ENSBTAP00000093738.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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