Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NIF3L1 ENSBTAG00000018282

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Description

NGG1 interacting factor 3 like 1 [Source:VGNC Symbol;Acc:VGNC:32075]

Location

Primary_assembly 2: 89,531,065-89,548,724 forward strand.

ARS-UCD1.3:CM008169.2

About this gene

This gene has 7 transcripts (splice variants) and 207 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000130626.1	NIF3L1-202	1605	394aa	ENSBTAP00000091338.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000116499.1	NIF3L1-206	2601	349aa	ENSBTAP00000083624.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000024331.5	NIF3L1-204	1905	377aa	ENSBTAP00000024331.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q05B89	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000133342.1	NIF3L1-205	1766	285aa	ENSBTAP00000075435.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000070059.2	NIF3L1-207	1599	392aa	ENSBTAP00000060946.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LM63	-
ENSBTAT00000067436.2	NIF3L1-203	1587	389aa	ENSBTAP00000057237.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LG04	-
ENSBTAT00000130969.1	NIF3L1-201	1536	368aa	ENSBTAP00000088473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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