Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TRPS1 ENSBTAG00000017694

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Description

transcriptional repressor GATA binding 1 [Source:VGNC Symbol;Acc:VGNC:36395]

Location

Primary_assembly 14: 48,629,687-48,904,940 forward strand.

ARS-UCD2.0:CM008181.2

About this gene

This gene has 3 transcripts (splice variants), 209 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000076789.3	TRPS1-201	4636	1293aa	ENSBTAP00000072188.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MM62	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000038232.6	TRPS1-203	5542	1286aa	ENSBTAP00000038047.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BBB8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000067073.3	TRPS1-202	5432	1284aa	ENSBTAP00000070256.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MHU0	-

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Summary

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