Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: YBX1 ENSBTAG00000017368

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Description

Y-box binding protein 1 [Source:VGNC Symbol;Acc:VGNC:50233]

Location

Primary_assembly 3: 103,520,076-103,540,533 reverse strand.

ARS-UCD2.0:CM008170.2

About this gene

This gene has 4 transcripts (splice variants), 173 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000023094.6	YBX1-204	1728	400aa	ENSBTAP00000023094.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6Z3R0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000084503.3	YBX1-202	1532	306aa	ENSBTAP00000074045.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MU45	-
ENSBTAT00000127299.1	YBX1-201	1518	367aa	ENSBTAP00000092280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T0H9	-
ENSBTAT00000146574.1	YBX1-203	1511	294aa	ENSBTAP00000105016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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