Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: AFP ENSBTAG00000017131

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Description

alpha fetoprotein [Source:VGNC Symbol;Acc:VGNC:25717]

Location

Primary_assembly 6: 88,511,182-88,532,729 forward strand.

ARS-UCD1.3:CM008173.2

About this gene

This gene has 3 transcripts (splice variants), 139 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000022772.4	AFP-202	2036	610aa	ENSBTAP00000022772.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3SZ57	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000128290.1	AFP-201	1965	600aa	ENSBTAP00000077290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000085595.2	AFP-203	1964	601aa	ENSBTAP00000074267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MIW0	-

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Summary

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