Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Regulation
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ID History
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Gene: MUC1 ENSBTAG00000017104

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Description

mucin 1, cell surface associated [Source:VGNC Symbol;Acc:VGNC:59186]

Location

Primary_assembly 3: 15,427,824-15,432,023 forward strand.

ARS-UCD2.0:CM008170.2

About this gene

This gene has 4 transcripts (splice variants) and 95 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000078750.2	MUC1-204	2369	640aa	ENSBTAP00000068954.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MEM9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000072582.3	MUC1-201	2334	640aa	ENSBTAP00000065814.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M633	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000014051.7	MUC1-202	2154	580aa	ENSBTAP00000014051.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DIE7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000086494.2	MUC1-203	2133	573aa	ENSBTAP00000064682.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M4E9	-

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Summary

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