Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TMEM42 ENSBTAG00000016731

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Description

transmembrane protein 42 [Source:VGNC Symbol;Acc:VGNC:36087]

Location

Primary_assembly 22: 54,270,526-54,274,809 reverse strand.

ARS-UCD1.3:CM008189.2

About this gene

This gene has 2 transcripts (splice variants) and 212 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000022236.5	TMEM42-201	1662	331aa	ENSBTAP00000022236.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2KIX3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000071928.2	TMEM42-202	1502	275aa	ENSBTAP00000064166.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M2V3	-

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Summary

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