Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Orthologues
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  - Gene tree
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Gene: CHCHD4 ENSBTAG00000015529

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Description

coiled-coil-helix-coiled-coil-helix domain containing 4 [Source:VGNC Symbol;Acc:VGNC:27273]

Location

Primary_assembly 22: 58,085,451-58,092,161 forward strand.

ARS-UCD1.3:CM008189.2

About this gene

This gene has 4 transcripts (splice variants) and 308 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000096360.1	CHCHD4-201	1511	172aa	ENSBTAP00000096376.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000095987.1	CHCHD4-203	1432	132aa	ENSBTAP00000102599.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000135549.1	CHCHD4-202	1345	137aa	ENSBTAP00000085012.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000020635.5	CHCHD4-204	1304	137aa	ENSBTAP00000020635.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2KHZ4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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