Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PLA2G16 ENSBTAG00000015248

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Description

phospholipase A2, group XVI [Source:NCBI gene (formerly Entrezgene);Acc:506802]

Gene Synonyms

HRASLS3

Location

Primary_assembly 29: 41,963,976-41,994,238 reverse strand.

ARS-UCD2.0:CM008196.2

About this gene

This gene has 7 transcripts (splice variants), 216 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000124495.1	PLA2G16-206	1920	239aa	ENSBTAP00000097096.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TIW5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000117914.1	PLA2G16-207	1650	183aa	ENSBTAP00000098458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TQ11	-
ENSBTAT00000093645.1	PLA2G16-202	1000	215aa	ENSBTAP00000094317.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TC64	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000088973.1	PLA2G16-204	952	199aa	ENSBTAP00000081637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SCP3	-
ENSBTAT00000080502.2	PLA2G16-203	853	225aa	ENSBTAP00000064362.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M7I5	-
ENSBTAT00000092879.1	PLA2G16-201	639	157aa	ENSBTAP00000077550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RVX9	-
ENSBTAT00000078451.2	PLA2G16-205	583	161aa	ENSBTAP00000073750.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NMD6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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