Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ZIC4 ENSBTAG00000014749

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Description

Zic family member 4 [Source:VGNC Symbol;Acc:VGNC:37187]

Location

Primary_assembly 1: 120,891,649-120,921,569 forward strand.

ARS-UCD1.3:CM008168.2

About this gene

This gene has 6 transcripts (splice variants), 200 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000096763.1	ZIC4-203	1155	384aa	ENSBTAP00000093787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000106604.1	ZIC4-201	1329	335aa	ENSBTAP00000084785.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000095306.1	ZIC4-206	1281	338aa	ENSBTAP00000102170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000032993.5	ZIC4-202	1096	271aa	ENSBTAP00000032920.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BAQ8	-
ENSBTAT00000089962.1	ZIC4-205	918	250aa	ENSBTAP00000074808.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000075546.2	ZIC4-204	512	129aa	ENSBTAP00000062960.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N1K5	-

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Summary

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