Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: VSX2 ENSBTAG00000014632

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Description

visual system homeobox 2 [Source:VGNC Symbol;Acc:VGNC:36846]

Location

Primary_assembly 10: 85,599,406-85,619,777 forward strand.

ARS-UCD2.0:CM008177.2

About this gene

This gene has 1 transcript (splice variant), 249 orthologues and 44 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000019481.6	VSX2-201	2346	381aa	ENSBTAP00000019481.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N3B5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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