Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: AP1S1 ENSBTAG00000014468

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Description

adaptor related protein complex 1 subunit sigma 1 [Source:VGNC Symbol;Acc:VGNC:25981]

Location

Primary_assembly 25: 35,578,164-35,585,281 reverse strand.

ARS-UCD2.0:CM008192.2

About this gene

This gene has 4 transcripts (splice variants), 203 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000119697.1	AP1S1-204	1036	176aa	ENSBTAP00000093899.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TCP1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000019237.5	AP1S1-201	1715	157aa	ENSBTAP00000019237.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1JQ98	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000076282.2	AP1S1-202	1402	158aa	ENSBTAP00000074095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MIG2	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000121629.1	AP1S1-203	1027	173aa	ENSBTAP00000085525.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SJL7	-

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Summary

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