Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TBC1D1 ENSBTAG00000013699

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Description

TBC1 domain family member 1 [Source:VGNC Symbol;Acc:VGNC:35623]

Location

Primary_assembly 6: 57,203,610-57,429,961 forward strand.

ARS-UCD1.3:CM008173.2

About this gene

This gene has 5 transcripts (splice variants), 201 orthologues and 33 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000083632.2	TBC1D1-201	5675	1259aa	ENSBTAP00000073240.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MSW4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000018206.6	TBC1D1-202	5318	1165aa	ENSBTAP00000018206.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O97790	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000068505.2	TBC1D1-203	5276	1151aa	ENSBTAP00000067275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M1P0	-
ENSBTAT00000076798.2	TBC1D1-205	5062	1125aa	ENSBTAP00000071005.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MAG3	-
ENSBTAT00000076984.2	TBC1D1-204	5024	1067aa	ENSBTAP00000061372.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M087	-

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Summary

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