Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ERC1 ENSBTAG00000013658

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Description

ELKS/RAB6-interacting/CAST family member 1 [Source:VGNC Symbol;Acc:VGNC:28566]

Location

Primary_assembly 5: 107,784,433-108,053,576 forward strand.

ARS-UCD2.0:CM008172.2

About this gene

This gene has 5 transcripts (splice variants), 275 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000083966.3	ERC1-202	8331	1120aa	ENSBTAP00000072787.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NKD1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000087049.3	ERC1-203	8319	1116aa	ENSBTAP00000058466.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LTK7	-
ENSBTAT00000086366.3	ERC1-205	8229	1088aa	ENSBTAP00000068177.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M3R8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000079957.3	ERC1-204	8187	1072aa	ENSBTAP00000060727.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LTQ2	-
ENSBTAT00000061182.5	ERC1-201	3323	1016aa	ENSBTAP00000053339.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BPW2	-

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Summary

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