Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LHX9 ENSBTAG00000013499

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Description

LIM homeobox 9 [Source:VGNC Symbol;Acc:VGNC:30878]

Location

Primary_assembly 16: 76,856,552-76,878,926 forward strand.

ARS-UCD2.0:CM008183.2

About this gene

This gene has 3 transcripts (splice variants), 203 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000043591.5	LHX9-203	2518	397aa	ENSBTAP00000041150.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0JNI8-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000151960.1	LHX9-202	1925	388aa	ENSBTAP00000105242.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000054943.5	LHX9-201	1914	321aa	ENSBTAP00000050628.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DJH3	-

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Summary

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