Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TSPAN1 ENSBTAG00000013320

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Description

tetraspanin 1 [Source:VGNC Symbol;Acc:VGNC:36425]

Location

Primary_assembly 3: 99,895,916-99,901,006 reverse strand.

ARS-UCD2.0:CM008170.2

About this gene

This gene has 2 transcripts (splice variants), 193 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000017715.4	TSPAN1-202	1284	241aa	ENSBTAP00000017715.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3T0S3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000095724.1	TSPAN1-201	1136	236aa	ENSBTAP00000094039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T7X5	-

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Summary

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