Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HSPD1 ENSBTAG00000012586

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Description

heat shock protein family D (Hsp60) member 1 [Source:VGNC Symbol;Acc:VGNC:49070]

Location

Primary_assembly 2: 86,034,949-86,045,955 reverse strand.

ARS-UCD1.3:CM008169.2

About this gene

This gene has 4 transcripts (splice variants), 292 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000064253.3	HSPD1-204	2781	703aa	ENSBTAP00000055431.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MUZ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000130344.1	HSPD1-201	3049	562aa	ENSBTAP00000093537.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000016708.7	HSPD1-202	2455	541aa	ENSBTAP00000016708.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MUZ9	-
ENSBTAT00000131992.1	HSPD1-203	2278	482aa	ENSBTAP00000090421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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