Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: FOXA2 ENSBTAG00000012407

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Description

forkhead box A2 [Source:VGNC Symbol;Acc:VGNC:29078]

Location

Primary_assembly 13: 41,542,246-41,546,933 reverse strand.

ARS-UCD2.0:CM008180.2

About this gene

This gene has 2 transcripts (splice variants), 249 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000016463.7	FOXA2-201	2586	461aa	ENSBTAP00000016463.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MZB6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000123940.1	FOXA2-202	2262	448aa	ENSBTAP00000076119.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RY15	-

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Summary

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