Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
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Pathway
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External references
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ID History
- Gene history

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Gene: LIMA1 ENSBTAG00000012342

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Description

LIM domain and actin binding 1 [Source:VGNC Symbol;Acc:VGNC:30886]

Location

Primary_assembly 5: 29,637,244-29,729,193 forward strand.

ARS-UCD1.3:CM008172.2

About this gene

This gene has 4 transcripts (splice variants) and 234 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000076165.2	LIMA1-201	3860	812aa	ENSBTAP00000073230.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BDU8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000016376.6	LIMA1-202	3710	762aa	ENSBTAP00000016376.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BDU8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000085765.2	LIMA1-203	3638	738aa	ENSBTAP00000064019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M208	-
ENSBTAT00000119974.1	LIMA1-204	3614	730aa	ENSBTAP00000103573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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