Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CDX1 ENSBTAG00000012014

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Description

caudal type homeobox 1 [Source:VGNC Symbol;Acc:VGNC:106683]

Location

Primary_assembly 7: 61,521,972-61,539,125 forward strand.

ARS-UCD2.0:CM008174.2

About this gene

This gene has 1 transcript (splice variant), 95 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000015934.7	CDX1-201	1682	265aa	ENSBTAP00000015934.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QLL3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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