Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: BATF3 ENSBTAG00000011982

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Description

basic leucine zipper ATF-like transcription factor 3 [Source:VGNC Symbol;Acc:VGNC:26427]

Location

Primary_assembly 16: 70,845,276-70,859,124 forward strand.

ARS-UCD2.0:CM008183.2

About this gene

This gene has 4 transcripts (splice variants), 173 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000071561.2	BATF3-201	949	169aa	ENSBTAP00000058021.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LH73	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000075202.2	BATF3-202	1054	122aa	ENSBTAP00000072080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MQN1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000067876.2	BATF3-204	1042	132aa	ENSBTAP00000068663.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NBH3	-
ENSBTAT00000015898.6	BATF3-203	820	126aa	ENSBTAP00000015898.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BEL2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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