Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: MSANTD2 ENSBTAG00000011248

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Description

Myb/SANT DNA binding domain containing 2 [Source:VGNC Symbol;Acc:VGNC:31689]

Location

Primary_assembly 29: 28,245,881-28,276,250 reverse strand.

ARS-UCD1.3:CM008196.2

About this gene

This gene has 4 transcripts (splice variants) and 210 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000061519.4	MSANTD2-201	2815	644aa	ENSBTAP00000053734.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MDC7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000091483.1	MSANTD2-202	2704	607aa	ENSBTAP00000083545.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000106019.1	MSANTD2-203	2320	589aa	ENSBTAP00000093642.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000085429.2	MSANTD2-204	651	180aa	ENSBTAP00000065189.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M5J5	-

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Summary

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