Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SDC1 ENSBTAG00000011154

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Description

syndecan 1 [Source:VGNC Symbol;Acc:VGNC:34378]

Location

Primary_assembly 11: 78,647,246-78,653,583 forward strand.

ARS-UCD1.3:CM008178.2

About this gene

This gene has 1 transcript (splice variant), 133 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000014810.6	SDC1-201	2261	307aa	ENSBTAP00000014810.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08DZ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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