Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: AP1S3 ENSBTAG00000011133

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Description

adaptor related protein complex 1 subunit sigma 3 [Source:VGNC Symbol;Acc:VGNC:25982]

Location

Primary_assembly 2: 111,898,333-111,965,349 reverse strand.

ARS-UCD2.0:CM008169.2

About this gene

This gene has 10 transcripts (splice variants), 251 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000014784.6	AP1S3-207	2661	251aa	ENSBTAP00000014784.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6QE02	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000132726.1	AP1S3-204	2643	163aa	ENSBTAP00000091286.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T0S3	-
ENSBTAT00000135445.1	AP1S3-206	2591	156aa	ENSBTAP00000097762.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TLE8	-
ENSBTAT00000088340.1	AP1S3-201	2468	154aa	ENSBTAP00000094379.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T8S9	-
ENSBTAT00000115019.1	AP1S3-203	2448	165aa	ENSBTAP00000090949.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SZV0	-
ENSBTAT00000100793.1	AP1S3-202	2417	167aa	ENSBTAP00000079585.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S137	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000103320.1	AP1S3-205	2416	169aa	ENSBTAP00000090114.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T351	-
ENSBTAT00000079279.2	AP1S3-208	594	154aa	ENSBTAP00000057937.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LMK0	-
ENSBTAT00000105809.2	AP1S3-210	546	137aa	ENSBTAP00000081632.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SCN6	-
ENSBTAT00000142344.1	AP1S3-209	454	63aa	ENSBTAP00000105594.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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