Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: APOO ENSBTAG00000010937

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Description

apolipoprotein O [Source:VGNC Symbol;Acc:VGNC:26035]

Location

Primary_assembly X: 119,338,014-119,391,670 forward strand.

ARS-UCD1.3:CM008197.2

About this gene

This gene has 5 transcripts (splice variants), 297 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000014525.7	APOO-201	1321	279aa	ENSBTAP00000014525.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q148H0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000114513.1	APOO-203	1021	206aa	ENSBTAP00000092283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000103751.1	APOO-204	1004	210aa	ENSBTAP00000085607.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000067900.2	APOO-202	858	188aa	ENSBTAP00000060951.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LM66	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000084124.2	APOO-205	582	193aa	ENSBTAP00000068283.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MBY2	-

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Summary

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