Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LRIG1 ENSBTAG00000010360

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Description

leucine rich repeats and immunoglobulin like domains 1 [Source:VGNC Symbol;Acc:VGNC:30982]

Location

Primary_assembly 22: 34,953,195-35,068,404 forward strand.

ARS-UCD2.0:CM008189.2

About this gene

This gene has 4 transcripts (splice variants), 204 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000089979.2	LRIG1-201	5146	1172aa	ENSBTAP00000095133.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TEC8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000123276.2	LRIG1-203	5217	1064aa	ENSBTAP00000080765.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SA15	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000128946.2	LRIG1-202	5159	1042aa	ENSBTAP00000079164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S5P1	-
ENSBTAT00000101116.2	LRIG1-204	4568	1038aa	ENSBTAP00000085310.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SIZ6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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