Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ZNF397 ENSBTAG00000010252

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Description

zinc finger protein 397 [Source:NCBI gene (formerly Entrezgene);Acc:506448]

Location

Primary_assembly 24: 21,768,421-21,783,976 reverse strand.

ARS-UCD1.3:CM008191.2

About this gene

This gene has 4 transcripts (splice variants), 85 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000129196.1	ZNF397-202	2831	582aa	ENSBTAP00000081287.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000013542.6	ZNF397-203	1787	560aa	ENSBTAP00000013542.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DIB9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000092309.1	ZNF397-201	742	213aa	ENSBTAP00000076481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000088638.1	ZNF397-204	700	204aa	ENSBTAP00000079666.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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