Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CLIC5 ENSBTAG00000010244

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Description

chloride intracellular channel 5 [Source:VGNC Symbol;Acc:VGNC:107286]

Location

Primary_assembly 23: 19,158,778-19,350,762 reverse strand.

ARS-UCD2.0:CM008190.2

About this gene

This gene has 7 transcripts (splice variants), 253 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000013537.6	CLIC5-205	1559	437aa	ENSBTAP00000013537.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MIH4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000107904.1	CLIC5-204	1531	429aa	ENSBTAP00000082380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S8K9	-
ENSBTAT00000073323.2	CLIC5-203	1187	289aa	ENSBTAP00000066719.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MD28	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000121598.1	CLIC5-201	922	240aa	ENSBTAP00000097665.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TMU0	-
ENSBTAT00000128153.1	CLIC5-207	859	219aa	ENSBTAP00000076813.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RWK0	-
ENSBTAT00000092225.1	CLIC5-206	820	206aa	ENSBTAP00000098625.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TJI7	-
ENSBTAT00000107208.1	CLIC5-202	805	202aa	ENSBTAP00000094655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TCR9	-

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Summary

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