Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Gene: NFYA ENSBTAG00000009905

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Description

nuclear transcription factor Y subunit alpha [Source:VGNC Symbol;Acc:VGNC:32055]

Location

Primary_assembly 23: 14,998,799-15,024,910 forward strand.

ARS-UCD2.0:CM008190.2

About this gene

This gene has 3 transcripts (splice variants) and 232 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000117421.2	NFYA-203	4009	346aa	ENSBTAP00000100661.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TQ12	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000013080.8	NFYA-202	3804	340aa	ENSBTAP00000013080.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6YUH2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000047312.4	NFYA-201	3723	312aa	ENSBTAP00000044528.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6RDM1 Q1LZF0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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