Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PHF21A ENSBTAG00000009611

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Description

PHD finger protein 21A [Source:VGNC Symbol;Acc:VGNC:32821]

Location

Primary_assembly 15: 75,960,825-76,117,826 reverse strand.

ARS-UCD1.3:CM008182.2

About this gene

This gene has 5 transcripts (splice variants), 233 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000012652.6	PHF21A-203	2762	682aa	ENSBTAP00000012652.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MS13	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000068998.2	PHF21A-202	2621	635aa	ENSBTAP00000066989.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M959	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000073304.2	PHF21A-201	2510	598aa	ENSBTAP00000070836.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M959	-
ENSBTAT00000082725.2	PHF21A-204	2001	599aa	ENSBTAP00000066672.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M959	-
ENSBTAT00000129792.1	PHF21A-205	1340	132aa	ENSBTAP00000101361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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